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Development of containerized pipelines for the reproducible analysis of amplicon-, shotgun metagenomic- and metatranscriptomic data.
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Sequence, organization, and genes characteristics of ORFs identified in a metagenomic DNA fragment from microbial community of the deep brine environment of Atlantis II in the Red Sea.
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Clinical utility of next-generation sequencing in children with cryptogenic cerebral palsy; a cohort study from a tertiary paediatric neurology clinic in the Western Cape Province of South Africa
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Investigation of the contribution of oral bacterial microbiota to health and disease in a South African cohort.
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A metagenomic approach using next-generation sequencing for viral profiling of a vineyard and genetic characterization of grapevine virus E
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The application of clinical metagenomics to central nervous system infections in a resource-limited setting
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Using oligonucleotide signatures to build a system for effective detection of pathogenic bacteria in metagenomic samples
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The assessment and validation of DNA variants detected by massively parallel sequencing using gene panels
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Detection of host and pathogen biomarkers for Mycobacterium bovis infection in African big cats (lions (Panthera leo), leopards (Panthera pardus), cheetahs (Acinonyx jubatus))
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Analysis of South African families with familial Parkinson’s Disease
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Application of RNA sequencing for the identification of microorganisms at the tick-host interface
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Characterisation of rotavirus strains responsible for breakthrough diarrhoeal disease among Zambian children using whole genome sequencing
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Metagenomic Profiling of Gut Microbiome Signatures Across Liver Disease Stages and HCV-Related Hepatocellular Carcinoma in Egyptian Patients
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Metagenomic guided isolation of sporoactinomycetes from soil and screening for antimycobacterial activity
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The utility of next generation sequencing at a Paediatric Neurology Department at Tygerberg Hospital, Western Cape, South Africa
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Systematic and genomic studies in the plant genus
Zygophyllum
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Identification of early indicators of CTV induced stem pitting to aid the selection of CTV cross protection sources.
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Describing Gut Microbial Communities using Oxford Nanopore Long-read Sequencing
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Cloning, expression and preliminary characterization of a novel nitrilase from the Red Sea, Atlantis II Deep brine pool using a metagenomic approach
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In silico identification of potential biomass and cell wall degrading enzymes in the microbial community of the Red Sea Atlantis-II brine pool using metagenomic approach
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A voyage to finding unculturable acidobacteriota from fynbos and arid regions in South Africa
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Detection, identification and live/dead differentiation of the emerging pathogen Enterobacter sakazakii from infant formula milk and the processing environment
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Utility of genetic testing in children with developmental and epileptic encephalopathy (DEE) at a tertiary hospital in South Africa: A prospective study
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2020-12-11 Global transcriptomic investigation of the human macrophage response towards pathogenic/non-pathogenic mycobacteria
