Anthropozoonotic spillovers reveal sustained long-term cryptic circulation of SARS-CoV-2 within and between Lithuanian mink farms

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Continuous phylogeography reveals shifting environmental drivers of highly pathogenic avian influenza H5 spread in Italy, 2016–23

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Sequence based virus host prediction: a curated dataset and generalizable framework for training artificial intelligence to identify viruses of humans

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Experimental evolution of the host range dynamics in two isolates of potato virus Y

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Evolution and viral properties of the SARS-CoV-2 BA.3.2 subvariant

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Chronic infections can generate SARS-CoV-2-like bursts of viral evolution without epistasis

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Begomovirus species demarcation based on genome-sequence identity yields non-monophyletic species: a case study of sweet potato-infecting begomoviruses

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Introduction and inter-species transmission dynamics of high pathogenicity avian influenza H5N1 viruses in Japan 2021–25

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Genomic analysis of Ostreococcus tauri-infecting viruses reveals a hypervariable region associated with host–virus interactions

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Clonal interference and changing selective pressures shape the escape of SARS-CoV-2 from hundreds of antibodies

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Deletion detection in SARS-CoV-2 genomes from COVID-19 patients: elimination of false positives

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Wild birds drive the introduction, maintenance, and spread of H5N1 clade 2.3.4.4b high pathogenicity avian influenza viruses in Spain, 2021–2022

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The whole genome analysis of four Orf virus strains from Europe and South America

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The S190R mutation in RSV-A F protein impairs nirsevimab binding and neutralization capacity

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A phylogenetic contribution to understanding the panzootic spread of African swine fever: from the global to the local scale

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Unveiling the RNA virus landscape of Cotesia chilonis: geographic distribution, diversity, and potential roles in parasitoid–host interactions

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Intrahost population dynamics of chikungunya virus in humans and naturally infected Aedes mosquitoes reveal transmission-driven diversity

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Coxsackievirus A6 was the predominant pathogen of hand, foot, and mouth disease with frequent recombination and mutations in Shandong Province, 2023

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Intra-host GI.1 norovirus evolution is shaped by genetic drift and purifying selection

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Contrasting genome composition and codon usage in Listeria monocytogenes temperate versus virulent phages

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