Chaotic Dynamics of Polyatomic Systems with an Emphasis on DNA Models by Hillebrand, Malcolm

“…Investigations are performed for a wide variety of randomly generated sequences as well as biological promoters. Furthermore, the properties of these thermally induced bubbles are studied through large-scale molecular dynamics simulations. …”
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The application of neural differential equations to enzymatic time-series by Heusdens, Danica Aimee

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Carcinus maenas in South Africa : status, impacts and management by Mabin, Clova Airth

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Control analysis of the action potential and its propagation in the Hodgkin-Huxley model by Du Toit, Francois

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Active contraction of the left ventricle with cardiac tissue modelled as a micromorphic medium by Kamper, Marina

“…There are several challenges related to computational modelling of cardiac muscle tissue. This is due in part to the anisotropic, non-linear and time-dependent behaviour as well as the complex hierarchical material structure of biological tissues. …”
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The general continuum model for structured populations, with two case studies in plant ecology by Laurie, Henri De Guise

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Complex, deterministic hydrological modelling towards decision support for urban catchment management by Males, Ryan James

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Clustering time-course data using P-splines and mixed effects mixture models

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Development of a platform for rational diagnostic design using a venom-antibody model by Lermer, Anné

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Some models and their nonstandard discretizations for honeybee (Apis mellifera L) colony population dynamics

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Mathematical modelling of sediment transport dynamics in the Berg River considering current and future water resources development scenarios by Van der Walt, Sarel C.

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Characterising the effect of microwave treatment on bio-leaching of coarse, massive sulphide ore particles by Charikinya, Edson

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Novel on-chip applications using silicon photonics by Gamal, Rania

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A thermosiphon photobioreactor for photofermentative hydrogen production by Rhodopseudomonas palustris. by Bosman, Catharine Elizabeth

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Fourier ptychographic microscopy for high-resolution, large field of view imaging by Fouche, Eugene Egbert

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Re-coding of UCTPHO and UCTOLD in Visual Basic for Applications by De Swardt, Gerard

“…One aspect is very important to note about the models embedded in these codes – UCTOLD and ASM1 are only for biological N removal systems and UCTPHO and ASM2 are only for biological N and P removal systems. …”
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A Proper Orthogonal Decomposition-based inverse material parameter optimization method with applications to cardiac mechanics by Moodley, Kamlin

“…The development of realistic computer models of mechanical behaviour for soft biological tissues, such as cardiac tissue, is dependent on the formulation of appropriate constitutive laws and accurate identification of their material parameters. …”
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Measurement of active biomass in activated sludge mixed liquor by Cronjé, Gerhard Louis

“…This implementation has been aided by the development of a suite of steady state design models (e.g., WRC, 1984; Wentzel et al., 1990; Maurer and Gujer, 1994) and kinetic simulation models (e.g. …”
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Finite element analysis of flows in secondary settling tanks by Kleine, Dorothee

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In silico investigation of the mechanism of ricin-catalysed depurination reaction and design of novel ricin inhibitors by Jayakody, Ranga S

“…The primary objective of this thesis is to describe the catalytic mechanism of ricin using computational reaction dynamics. For an accurate simulation of the ricin-catalysed reaction, a reasonable model of the target natural substrate is required.…”
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