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Evaluating postcranial macromorphoscopic traits to estimate ancestry among modern South Africans

Dissertation (MSc (Anatomy))--University of Pretoria, 2023.

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Other Authors: Liebenberg, Leandi
Format: Thesis
Language:English
Published: University of Pretoria 2023
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access_status_str Open Access
author2 Liebenberg, Leandi
author_browse Liebenberg, Leandi
author_facet Liebenberg, Leandi
collection Thesis
dc_rights_str_mv © 2022 University of Pretoria. All rights reserved. The copyright in this work vests in the University of Pretoria. No part of this work may be reproduced or transmitted in any form or by any means, without the prior written permission of the University of Pretoria.
description Dissertation (MSc (Anatomy))--University of Pretoria, 2023.
format Thesis
id oai:repository.up.ac.za:2263/89287
institution University of Pretoria (South Africa)
language English
last_indexed 2026-06-10T12:39:11.459Z
license_str Other — see source repository
provenance_str_mv Harvested via OAI-PMH from UPSpace — University of Pretoria Institutional Repository
publishDate 2023
publishDateRange 2023
publishDateSort 2023
publisher University of Pretoria
publisherStr University of Pretoria
record_format dspace
source_str UPSpace — University of Pretoria Institutional Repository
spelling oai:repository.up.ac.za:2263/89287 Evaluating postcranial macromorphoscopic traits to estimate ancestry among modern South Africans Liebenberg, Leandi u11049571@tuks.co.za L’Abbé, Ericka Noelle Bothma, Nomshado Pearl UCTD Population affinity Observer agreement Random forest model Classification accuracy Forensic anthropology Dissertation (MSc (Anatomy))--University of Pretoria, 2023. When decomposed human remains are recovered, the expertise of a forensic anthropologist is required to assist in the identification of the decedent. Identification involves establishing a biological profile, which includes the estimation of age, sex, ancestry, and stature of the individual. Robust methods are needed to assist in creating an accurate biological profile. While osteometric methods are currently preferred for ancestry estimation for forensic analyses in South Africa, non-metric methods can provide valuable information and need to be further explored. The current study aimed to assess postcranial macromorphoscopic traits as a tool to estimate ancestry among modern South Africans. A sample of 271 postcranial skeletons belonging to black, white, and coloured South Africans were used to score a series of eleven macromorphoscopic traits. The skeletal material was sourced from the Pretoria Bone Collection (University of Pretoria) and the Kirsten Skeletal Collection (Stellenbosch University). The intra- and inter-observer agreement ranged from fair to almost perfect for all but one trait (accessory transverse foramen of C1). The traits varied in frequency and rarity among the populations, with only seven traits demonstrating significant differences between at least two of the groups. Univariate and multivariate random forest models were created to test the positive predictive performance of the traits to classify ancestry. The univariate models performed poorly, with accuracies that ranged from 33.0% to 53.0%. The overall classification accuracy for the multivariate model incorporating all traits was not much better at 54.6% The results of the current study indicate that the postcranial macromorphoscopic approach does not outperform current methods employed to estimate ancestry. Furthermore, the low accuracies and Kappa values obtained with the random forest models suggest that the traits are not reliable classifiers, and as such, the method does not currently have practical applicability for medicolegal casework. However, with significant differences observed, more research needs to be conducted to potentially improve the method for use in South Africa. Anatomy MSc Anatomy Unrestricted 2023-02-08T07:18:13Z 2023-02-08T07:18:13Z 2023-04 2023 Dissertation * A2023 https://repository.up.ac.za/handle/2263/89287 10.25403/UPresearchdata.21967010 en © 2022 University of Pretoria. All rights reserved. The copyright in this work vests in the University of Pretoria. No part of this work may be reproduced or transmitted in any form or by any means, without the prior written permission of the University of Pretoria. application/pdf University of Pretoria
spellingShingle UCTD
Population affinity
Observer agreement
Random forest model
Classification accuracy
Forensic anthropology
Evaluating postcranial macromorphoscopic traits to estimate ancestry among modern South Africans
title Evaluating postcranial macromorphoscopic traits to estimate ancestry among modern South Africans
title_full Evaluating postcranial macromorphoscopic traits to estimate ancestry among modern South Africans
title_fullStr Evaluating postcranial macromorphoscopic traits to estimate ancestry among modern South Africans
title_full_unstemmed Evaluating postcranial macromorphoscopic traits to estimate ancestry among modern South Africans
title_short Evaluating postcranial macromorphoscopic traits to estimate ancestry among modern South Africans
title_sort evaluating postcranial macromorphoscopic traits to estimate ancestry among modern south africans
topic UCTD
Population affinity
Observer agreement
Random forest model
Classification accuracy
Forensic anthropology
url https://repository.up.ac.za/handle/2263/89287