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Delays in HIV-1 infant PCR testing may leave children without confirmed diagnoses

Thesis (MMed)--Stellenbosch University, 2021.

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Main Author: Mahlakwane, Kamela L.
Other Authors: Van Zyl, Gert
Format: Thesis
Language:en_ZA
Published: Stellenbosch : Stellenbosch University 2021
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access_status_str Open Access
author Mahlakwane, Kamela L.
author2 Van Zyl, Gert
author_browse Mahlakwane, Kamela L.
Van Zyl, Gert
author_facet Van Zyl, Gert
Mahlakwane, Kamela L.
author_sort Mahlakwane, Kamela L.
collection Thesis
dc_rights_str_mv Stellenbosch University
description Thesis (MMed)--Stellenbosch University, 2021.
format Thesis
id oai:scholar.sun.ac.za:10019.1/123660
institution Stellenbosch University (South Africa)
language en_ZA
last_indexed 2026-06-10T12:43:12.690Z
license_str Other — see source repository
provenance_str_mv Harvested via OAI-PMH from SUNScholar — Stellenbosch University Repository
publishDate 2021
publishDateRange 2021
publishDateSort 2021
publisher Stellenbosch : Stellenbosch University
publisherStr Stellenbosch : Stellenbosch University
record_format dspace
source_str SUNScholar — Stellenbosch University Repository
spelling oai:scholar.sun.ac.za:10019.1/123660 Delays in HIV-1 infant PCR testing may leave children without confirmed diagnoses Mahlakwane, Kamela L. Van Zyl, Gert Preiser, Wolfgang Stellenbosch University. Faculty of Medicine and Health Sciences. Dept. of Pathology: Medical Virology. HIV -- Infant -- Diagnosis UCTD HIV-positive children Antiretroviral drugs Diagnosis, Laboratory Polymerase chain reaction -- Diagnostic use Thesis (MMed)--Stellenbosch University, 2021. Background The early diagnosis and confirmation of HIV infection in newborns is crucial for expedited antiretroviral therapy initiation. Confirmatory testing must be done for all children with a reactive HIV PCR result. There is no comprehensive data on confirmatory testing and rejection of HIV PCR test requests at National Health Laboratory Service laboratories. Aim and objectives To assess relevant measures for routine infant HIV PCR testing: rate of rejected test requests, turnaround time, and rate of confirmatory testing. Method A retrospective review was performed on the laboratory-based data of all HIV PCR tests that were performed on children ≤24 months old (n=43,346), and data of rejected HIV PCR requests (n=1,479) over a two-year period (2017-2019). These data were extracted from the laboratory information system. Data were analyzed from sample collection to release of results, assessing the TAT and follow-up patterns. Results The proportion of HIV PCR requests that were rejected was 3.3%, of which 83.9% were rejected for various pre-analytical reasons. The majority of test results (89.2%) met the required 96-hour TAT. Of the reactive initial test results, 53.5% had a follow-up sample sent, of which 93.1% were positive on follow-up. Of the initial indeterminate results, 74.7% were negative on follow-up. Conclusion A significant proportion of HIV PCR requests were rejected for various pre-analytical reasons. The high number of initial reactive tests, without evidence of follow-up, may suggest that a shorter TAT would be required to allow confirmatory testing, before children are discharged. AFRIKAANSE OPSOMMING: Geen opsomming beskikbaar Masters 2021-07-13T09:25:08Z 2021-12-22T14:14:33Z 2021-07-13T09:25:08Z 2021-12-22T14:14:33Z 2021-12 Thesis http://hdl.handle.net/10019.1/123660 en_ZA Stellenbosch University 34 pages application/pdf Stellenbosch : Stellenbosch University
spellingShingle HIV -- Infant -- Diagnosis
UCTD
HIV-positive children
Antiretroviral drugs
Diagnosis, Laboratory
Polymerase chain reaction -- Diagnostic use
Mahlakwane, Kamela L.
Delays in HIV-1 infant PCR testing may leave children without confirmed diagnoses
title Delays in HIV-1 infant PCR testing may leave children without confirmed diagnoses
title_full Delays in HIV-1 infant PCR testing may leave children without confirmed diagnoses
title_fullStr Delays in HIV-1 infant PCR testing may leave children without confirmed diagnoses
title_full_unstemmed Delays in HIV-1 infant PCR testing may leave children without confirmed diagnoses
title_short Delays in HIV-1 infant PCR testing may leave children without confirmed diagnoses
title_sort delays in hiv 1 infant pcr testing may leave children without confirmed diagnoses
topic HIV -- Infant -- Diagnosis
UCTD
HIV-positive children
Antiretroviral drugs
Diagnosis, Laboratory
Polymerase chain reaction -- Diagnostic use
url http://hdl.handle.net/10019.1/123660
work_keys_str_mv AT mahlakwanekamelal delaysinhiv1infantpcrtestingmayleavechildrenwithoutconfirmeddiagnoses